Transcript: ENST00000586270.1 H3F3B-006

Description

H3 histone, family 3B (H3.3B) [Source:HGNC Symbol;Acc:4765]

Gene Synonyms

H3.3A, H3.3B, H3F3, H3F3A

Location

Chromosome 17: 73,774,691-73,775,684 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 14 domains and features, is associated with 1012 variant alleles and maps to 386 oligo probes.

Gene

This transcript is a product of gene ENSG00000132475.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000254810.4	H3F3B-001	2705	136aa	ENSP00000254810.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11729	B2R4P9 B4E380 K7EK07 P84243	NM_005324.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000592643.1	H3F3B-010	795	113aa	ENSP00000467165.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EP01	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591890.1	H3F3B-011	783	92aa	ENSP00000466663.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EMV3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587171.1	H3F3B-009	586	151aa	ENSP00000468484.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ES00	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000589599.1	H3F3B-005	576	136aa	ENSP00000465813.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11729	B2R4P9 B4E380 K7EK07 P84243	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587560.1	H3F3B-007	551	136aa	ENSP00000468714.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11729	B2R4P9 B4E380 K7EK07 P84243	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000586607.1	H3F3B-003	551	136aa	ENSP00000466020.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11729	B2R4P9 B4E380 K7EK07 P84243	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000586270.1	H3F3B-006	468	132aa	ENSP00000465403.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EK07	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000593254.1	H3F3B-002	894	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000591893.1	H3F3B-013	2787	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000586518.1	H3F3B-012	1701	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000589949.1	H3F3B-008	842	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000589417.1	H3F3B-004	575	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 468 bps, Translation length: 132 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000586270.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000448508 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000586270.1 H3F3B-006

Summary