Transcript: ENST00000560372.1 ANKRD17-013

Description

ankyrin repeat domain 17 [Source:HGNC Symbol;Acc:23575]

Gene Synonyms

FLJ22206, GTAR, KIAA0697, NY-BR-16

Location

Chromosome 4: 73,968,192-74,027,065 reverse strand.

About this transcript

This transcript has 23 exons, is annotated with 52 domains and features, is associated with 24828 variant alleles and maps to 574 oligo probes.

Gene

This transcript is a product of gene ENSG00000132466.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000358602.4	ANKRD17-001	10784	2603aa	ENSP00000351416.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34004	O75179	NM_032217.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558247.1	ANKRD17-012	8456	2487aa	ENSP00000453434.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000509867.2	ANKRD17-003	8105	2490aa	ENSP00000427151.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS68721	E7EUV3	NM_001286771.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000330838.6	ANKRD17-002	7734	2352aa	ENSP00000332265.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34003	O75179	NM_198889.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561029.1	ANKRD17-011	2717	862aa	ENSP00000453294.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YLQ3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000560372.1	ANKRD17-013	3698	828aa	ENSP00000453719.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000514252.1	ANKRD17-004	3259	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560507.1	ANKRD17-014	563	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000559367.1	ANKRD17-015	539	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510127.1	ANKRD17-009	504	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513908.1	ANKRD17-010	852	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 23, Coding exons: 15, Transcript length: 3,698 bps, Translation length: 828 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000560372.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000418948 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000560372.1 ANKRD17-013

Summary