Transcript: ENST00000442415.2 RAF1-007

Description

v-raf-1 murine leukemia viral oncogene homolog 1 [Source:HGNC Symbol;Acc:9829]

Gene Synonyms

CRAF, NS5, RAF, Raf-1, c-Raf

Location

Chromosome 3: 12,625,297-12,705,647 reverse strand.

About this transcript

This transcript has 18 exons, is annotated with 26 domains and features, is associated with 44292 variant alleles and maps to 692 oligo probes.

Gene

This transcript is a product of gene ENSG00000132155.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000251849.4	RAF1-001	3300	648aa	ENSP00000251849.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2612	L7RRS6 P04049	NM_002880.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000442415.2	RAF1-007	3085	668aa	ENSP00000401888.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P04049	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542177.1	RAF1-202	2346	567aa	ENSP00000443567.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E0X2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432427.2	RAF1-008	1831	527aa	ENSP00000398591.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E1N6 H7C155	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000534997.1	RAF1-201	1686	433aa	ENSP00000441186.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E1N6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423275.1	RAF1-006	2354	69aa	ENSP00000401088.1	Nonsense mediated decay		-	-	-
ENST00000416093.1	RAF1-010	962	69aa	ENSP00000391265.1	Nonsense mediated decay		-	-	-
ENST00000494557.1	RAF1-002	3205	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465826.1	RAF1-004	1518	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000471449.1	RAF1-009	804	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492690.1	RAF1-003	633	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475353.1	RAF1-012	599	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000491290.1	RAF1-011	572	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000460610.1	RAF1-005	484	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 3,085 bps, Translation length: 668 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P04049

Version

ENST00000442415.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000339671 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000442415.2 RAF1-007

Summary