Transcript: ENST00000590888.1 ACACA-011

Description

acetyl-CoA carboxylase alpha [Source:HGNC Symbol;Acc:84]

Gene Synonyms

ACAC, ACACAD, ACC, ACC1, ACCA

Location

Chromosome 17: 35,578,439-35,716,064 reverse strand.

About this transcript

This transcript has 29 exons, is associated with 55744 variant alleles and maps to 618 oligo probes.

Gene

This transcript is a product of gene ENSG00000132142.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000353139.5	ACACA-001	9962	2383aa	ENSP00000344789.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42302	A8MYL5 B2ZZ90 B4DIW1 B4DK31 B4DWK9 K4DID9 K7EII5 Q13085 Q7Z5W8	NM_198839.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360679.3	ACACA-002	9624	2288aa	ENSP00000353898.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11318	A8MYL5 B4DIW1 B4DK31 B4DWK9 K4DID9 K7EII5 Q13085 Q7Z5W8	NM_198837.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394406.2	ACACA-009	9554	2346aa	ENSP00000377928.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11317	A8MYL5 B2ZZ90 B4DIW1 B4DK31 B4DWK9 K4DID9 K7EII5 Q13085 Q7Z5W8	NM_198836.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000335166.5	ACACA-003	7912	2268aa	ENSP00000335323.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42303	A8MYL5 B4DIW1 B4DK31 B4DWK9 K4DID9 K7EII5 Q13085 Q7Z5W8	NM_198838.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591119.1	ACACA-012	5315	998aa	ENSP00000467820.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DIW1 B4DK31 B4DWK9 K4DID9 Q59FY4 Q7Z5W8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000361253.5	ACACA-201	1803	472aa	ENSP00000354565.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DIW1 B4DK31 B4DWK9 K4DID9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000451642.1	ACACA-004	1627	120aa	ENSP00000397282.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MYL5 Q13085	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000413318.1	ACACA-005	1064	42aa	ENSP00000391737.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MYL5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000416895.1	ACACA-202	1064	77aa	ENSP00000399445.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D3YTK0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000592427.1	ACACA-024	772	235aa	ENSP00000465478.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EK64	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000394403.1	ACACA-008	662	42aa	ENSP00000377925.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MYL5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000591148.1	ACACA-018	582	94aa	ENSP00000464763.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MYL5 K7EII5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000588142.1	ACACA-019	569	112aa	ENSP00000464991.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D3YTJ0 K7EJ22	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000586821.1	ACACA-025	463	96aa	ENSP00000466486.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000456561.2	ACACA-007	451	84aa	ENSP00000391001.2	Non stop decay		-	-	-
ENST00000587233.1	ACACA-013	2177	52aa	ENSP00000467354.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000456066.2	ACACA-010	1469	114aa	ENSP00000390132.2	Nonsense mediated decay		D3YTK0	-	-
ENST00000589665.1	ACACA-016	918	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000587545.1	ACACA-015	717	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000587653.1	ACACA-017	655	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000587598.1	ACACA-022	591	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000587720.1	ACACA-021	566	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000590888.1	ACACA-011	3974	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000593055.1	ACACA-014	1372	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000586621.1	ACACA-023	635	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000592243.1	ACACA-020	339	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 29, Coding exons: 0, Transcript length: 3,974 bps,

Version

ENST00000590888.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000451561 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000590888.1 ACACA-011

Summary