Transcript: ENST00000588523.1 DCAF15-004

Description

DDB1 and CUL4 associated factor 15 [Source:HGNC Symbol;Acc:25095]

Gene Synonyms

C19orf72, MGC99481

Location

Chromosome 19: 14,070,396-14,072,141 forward strand.

About this transcript

This transcript has 5 exons, is associated with 1107 variant alleles and maps to 351 oligo probes.

Gene

This transcript is a product of gene ENSG00000132017.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000254337.6	DCAF15-001	2271	600aa	ENSP00000254337.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32926	Q66K64	NM_138353.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000585468.1	DCAF15-006	815	272aa	ENSP00000466048.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000587307.1	DCAF15-003	711	201aa	ENSP00000468330.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000591802.1	DCAF15-002	506	54aa	ENSP00000466932.1	Nonsense mediated decay		K7ENG0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000588523.1	DCAF15-004	989	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000591385.1	DCAF15-005	431	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 989 bps,

Version

ENST00000588523.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000458103 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000588523.1 DCAF15-004

Summary