Transcript: ENST00000346736.2 C19orf57-001

Description

chromosome 19 open reading frame 57 [Source:HGNC Symbol;Acc:28153]

Gene Synonyms

MGC11271

Location

Chromosome 19: 13,993,168-14,016,978 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 4 domains and features, is associated with 11083 variant alleles and maps to 339 oligo probes.

Gene

This transcript is a product of gene ENSG00000132016.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000454313.1	C19orf57-201	2513	668aa	ENSP00000404382.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q0VDD7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000346736.2	C19orf57-001	2489	637aa	ENSP00000254336.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12299	Q0VDD7	NM_024323.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000586783.1	C19orf57-003	2454	668aa	ENSP00000465822.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q0VDD7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591586.1	C19orf57-002	1559	243aa	ENSP00000466723.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EMZ7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000589393.1	C19orf57-007	1049	295aa	ENSP00000464829.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000588115.1	C19orf57-008	718	87aa	ENSP00000467241.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EP60	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000591439.1	C19orf57-006	569	139aa	ENSP00000468467.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ERY6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000585755.1	C19orf57-005	360	25aa	ENSP00000466119.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ELK3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000586500.1	C19orf57-004	645	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 2,489 bps, Translation length: 637 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q0VDD7

CCDS

This transcript is a member of the Human CCDS set: CCDS12299

Version

ENST00000346736.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000457948 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000346736.2 C19orf57-001

Summary