Transcript: ENST00000254181.4 USP29-001

Description

ubiquitin specific peptidase 29 [Source:HGNC Symbol;Acc:18563]

Gene Synonyms

HOM-TES-84/86

Location

Chromosome 19: 57,631,411-57,643,294 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 12 domains and features, is associated with 6568 variant alleles and maps to 269 oligo probes.

Gene

This transcript is a product of gene ENSG00000131864.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000254181.4	USP29-001	3705	922aa	ENSP00000254181.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33124	A1L447 M0QZL0 Q9HBJ7	NM_020903.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000598197.1	USP29-004	3284	922aa	ENSP00000470747.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33124	A1L447 M0QZL0 Q9HBJ7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000600940.1	USP29-002	533	13aa	ENSP00000472876.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000600020.1	USP29-003	437	30aa	ENSP00000470618.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QZL0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 1, Transcript length: 3,705 bps, Translation length: 922 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9HBJ7

CCDS

This transcript is a member of the Human CCDS set: CCDS33124

Version

ENST00000254181.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Stop codons

This transcript has a variant, rs9973206, that causes a stop codon to be gained in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HAPMAP-ASW, CSHL-HAPMAP:HapMap-CEU, CSHL-HAPMAP:HAPMAP-TSI, ESP6500:African_American, CSHL-HAPMAP:HAPMAP-GIH, CSHL-HAPMAP:HapMap-HCB, CSHL-HAPMAP:HAPMAP-MEX, CSHL-HAPMAP:HapMap-YRI, CSHL-HAPMAP:HAPMAP-MKK, ESP6500:European_American, CSHL-HAPMAP:HapMap-JPT.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000465075 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000254181.4 USP29-001

Summary