Transcript: ENST00000308423.2 AOC3-001

Description

amine oxidase, copper containing 3 [Source:HGNC Symbol;Acc:550]

Gene Synonyms

HPAO, SSAO, VAP-1, VAP1

Location

About this transcript

This transcript has 4 exons, is annotated with 23 domains and features, is associated with 3588 variant alleles and maps to 364 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000308423.2	AOC3-001	4026	763aa	ENSP00000312326.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11444	K7EL47 K7EQZ5 K7ESB3 Q16853 Q9UEU7	NM_003734.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591562.1	AOC3-002	2522	220aa	ENSP00000468632.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS62198	K7EL47 K7EQZ5 K7ESB3 Q9UEU7	NM_001277732.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000592999.1	AOC3-004	573	152aa	ENSP00000465913.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EL47 K7EQZ5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000588033.1	AOC3-005	542	112aa	ENSP00000468043.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EQZ5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000587330.1	AOC3-003	545	144aa	ENSP00000464787.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 4,026 bps, Translation length: 763 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q16853

CCDS

This transcript is a member of the Human CCDS set: CCDS11444

Version

ENST00000308423.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000452444 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.