Transcript: ENST00000446023.2 MGAT1-003

Description

mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:7044]

Gene Synonyms

GGNT1, GLCNAC-TI, GLCT1, GLYT1, GNT-1, GNT-I, MGAT

Location

Chromosome 5: 180,217,548-180,236,829 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 10 domains and features, is associated with 9921 variant alleles and maps to 550 oligo probes.

Gene

This transcript is a product of gene ENSG00000131446.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000446023.2	MGAT1-003	3175	445aa	ENSP00000404718.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4458	D6R9U2 D6RA48 D6RAK2 D6RB69 D6RBS3 D6RD15 D6RF69 D6RHZ8 D6RIS2 P26572 Q59G70	NM_001114618.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000333055.3	MGAT1-001	3104	445aa	ENSP00000332073.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4458	D6R9U2 D6RA48 D6RAK2 D6RB69 D6RBS3 D6RD15 D6RF69 D6RHZ8 D6RIS2 P26572 Q59G70	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393340.3	MGAT1-201	3045	445aa	ENSP00000377010.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4458	D6R9U2 D6RA48 D6RAK2 D6RB69 D6RBS3 D6RD15 D6RF69 D6RHZ8 D6RIS2 P26572 Q59G70	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000307826.4	MGAT1-007	2761	445aa	ENSP00000311888.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4458	D6R9U2 D6RA48 D6RAK2 D6RB69 D6RBS3 D6RD15 D6RF69 D6RHZ8 D6RIS2 P26572 Q59G70	NM_002406.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427865.2	MGAT1-004	1919	445aa	ENSP00000402838.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4458	D6R9U2 D6RA48 D6RAK2 D6RB69 D6RBS3 D6RD15 D6RF69 D6RHZ8 D6RIS2 P26572 Q59G70	NM_001114620.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506889.1	MGAT1-019	1104	153aa	ENSP00000425988.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9U2 D6RA48 D6RAK2 D6RB69 D6RBS3 D6RD15 D6RHZ8 D6RIS2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000504671.1	MGAT1-027	878	199aa	ENSP00000424891.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9U2 D6RA48 D6RAK2 D6RB69 D6RBS3 D6RD15 D6RF69 D6RHZ8 D6RIS2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000502678.1	MGAT1-022	693	103aa	ENSP00000422588.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RA48 D6RBS3 D6RIS2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000514283.1	MGAT1-023	619	127aa	ENSP00000424382.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9U2 D6RA48 D6RAK2 D6RB69 D6RBS3 D6RD15 D6RIS2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000514438.1	MGAT1-009	607	104aa	ENSP00000421738.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RA48 D6RAK2 D6RBS3 D6RIS2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000507384.1	MGAT1-026	572	34aa	ENSP00000427433.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RIS2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000506269.1	MGAT1-025	564	111aa	ENSP00000422906.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9U2 D6RA48 D6RAK2 D6RBS3 D6RIS2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000513431.1	MGAT1-011	555	95aa	ENSP00000423401.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RA48 D6RIS2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000512695.1	MGAT1-024	549	115aa	ENSP00000427116.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9U2 D6RA48 D6RAK2 D6RBS3 D6RD15 D6RIS2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000506708.1	MGAT1-020	745	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000514760.1	MGAT1-010	613	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510341.1	MGAT1-017	553	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000504385.1	MGAT1-021	540	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505682.1	MGAT1-028	534	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000512080.1	MGAT1-013	532	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000508090.1	MGAT1-008	475	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000506033.1	MGAT1-018	464	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510962.1	MGAT1-014	445	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513149.1	MGAT1-012	356	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000508702.1	MGAT1-016	313	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 3,175 bps, Translation length: 445 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P26572

CCDS

This transcript is a member of the Human CCDS set: CCDS4458

Version

ENST00000446023.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000368189 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000446023.2 MGAT1-003

Summary