Transcript: ENST00000253413.5 ATP6V1E1-001

Description

ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1 [Source:HGNC Symbol;Acc:857]

Gene Synonyms

ATP6E, ATP6E2, ATP6V1E, P31, Vma4

Location

Chromosome 22: 18,074,902-18,111,584 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 9 domains and features, is associated with 17424 variant alleles and maps to 422 oligo probes.

Gene

This transcript is a product of gene ENSG00000131100.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000253413.5	ATP6V1E1-001	1402	226aa	ENSP00000253413.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13745	P36543 Q53Y06	NM_001696.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000399796.2	ATP6V1E1-006	1208	196aa	ENSP00000382694.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42978	P36543	NM_001039367.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000399798.2	ATP6V1E1-005	994	204aa	ENSP00000382696.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42977	P36543	NM_001039366.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413576.1	ATP6V1E1-004	800	203aa	ENSP00000398932.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J8H1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000478963.1	ATP6V1E1-003	587	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460085.1	ATP6V1E1-002	558	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473248.1	ATP6V1E1-009	832	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000484653.1	ATP6V1E1-007	747	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000481365.1	ATP6V1E1-008	692	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,402 bps, Translation length: 226 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P36543

CCDS

This transcript is a member of the Human CCDS set: CCDS13745

Version

ENST00000253413.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000131790 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000253413.5 ATP6V1E1-001

Summary