Transcript: ENST00000253233.1 C12orf65-001

Description

chromosome 12 open reading frame 65 [Source:HGNC Symbol;Acc:26784]

Gene Synonyms

COXPD7, FLJ38663, SPG55

Location

Chromosome 12: 123,717,463-123,742,506 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 6 domains and features, is associated with 11840 variant alleles and maps to 373 oligo probes.

Gene

This transcript is a product of gene ENSG00000130921.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000543139.1	C12orf65-003	3733	138aa	ENSP00000444843.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H4X5 F5H5V8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000253233.1	C12orf65-001	2073	166aa	ENSP00000253233.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9244	F5H4X5 F5H5V8 Q9H3J6	NM_152269.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000366329.2	C12orf65-201	1575	166aa	ENSP00000390647.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9244	F5H4X5 F5H5V8 Q9H3J6	NM_001143905.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000429587.2	C12orf65-007	1326	166aa	ENSP00000391513.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9244	F5H4X5 F5H5V8 Q9H3J6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536130.1	C12orf65-005	604	36aa	ENSP00000443072.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5V8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000546132.1	C12orf65-006	573	96aa	ENSP00000441796.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GWJ6 F5H5V8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000425637.2	C12orf65-002	1632	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000538888.1	C12orf65-008	727	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 2,073 bps, Translation length: 166 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H3J6

CCDS

This transcript is a member of the Human CCDS set: CCDS9244

Version

ENST00000253233.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000401375 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000253233.1 C12orf65-001

Summary