Transcript: ENST00000252971.6 MNX1-001

Description

motor neuron and pancreas homeobox 1 [Source:HGNC Symbol;Acc:4979]

Gene Synonyms

HB9, HLXB9, HOXHB9, SCRA1

Location

Chromosome 7: 156,797,547-156,803,345 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 17 domains and features, is associated with 3664 variant alleles and maps to 390 oligo probes.

Gene

This transcript is a product of gene ENSG00000130675.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000252971.6	MNX1-001	2174	401aa	ENSP00000252971.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34788	P50219	NM_005515.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543409.1	MNX1-201	1620	189aa	ENSP00000438552.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55187	C9K088 P50219	NM_001165255.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000428439.1	MNX1-004	631	82aa	ENSP00000401158.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9K088	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000425745.1	MNX1-005	322	29aa	ENSP00000416458.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JFT4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000469500.1	MNX1-006	209	36aa	ENSP00000475129.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R464	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000479817.1	MNX1-003	169	31aa	ENSP00000474286.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000474448.1	MNX1-007	1101	143aa	ENSP00000473965.1	Nonsense mediated decay		S4R364	-	-
ENST00000605400.1	MNX1-008	1753	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 2,174 bps, Translation length: 401 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P50219

CCDS

This transcript is a member of the Human CCDS set: CCDS34788

Version

ENST00000252971.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000347796 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000252971.6 MNX1-001

Summary