Transcript: ENST00000381061.4 ATXN10-201

Description

ataxin 10 [Source:HGNC Symbol;Acc:10549]

Gene Synonyms

E46L, FLJ37990, HUMEEP, SCA10

Location

Chromosome 22: 46,067,678-46,241,184 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 9 domains and features, is associated with 75385 variant alleles and maps to 635 oligo probes.

Gene

This transcript is a product of gene ENSG00000130638.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000252934.5	ATXN10-001	3329	475aa	ENSP00000252934.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14070	Q9NTC6 Q9UBB4	NM_013236.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381061.4	ATXN10-201	3135	411aa	ENSP00000370449.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54540	Q9NTC6 Q9UBB4	NM_001167621.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435026.1	ATXN10-010	653	197aa	ENSP00000391117.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AHE4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000402380.3	ATXN10-009	564	126aa	ENSP00000385624.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AHE3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000451241.1	ATXN10-007	514	172aa	ENSP00000414080.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000498009.1	ATXN10-002	873	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493643.1	ATXN10-006	617	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476998.1	ATXN10-004	482	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464482.1	ATXN10-008	439	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470722.1	ATXN10-003	391	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483549.1	ATXN10-005	778	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 3,135 bps, Translation length: 411 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UBB4

CCDS

This transcript is a member of the Human CCDS set: CCDS54540

Version

ENST00000381061.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000381061.4 ATXN10-201

Summary