Transcript: ENST00000511009.1 MBD4-010

Description

methyl-CpG binding domain protein 4 [Source:HGNC Symbol;Acc:6919]

Gene Synonyms

MED1

Location

Chromosome 3: 129,151,376-129,152,396 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 465 variant alleles and maps to 194 oligo probes.

Gene

This transcript is a product of gene ENSG00000129071.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000429544.2	MBD4-003	2478	574aa	ENSP00000394080.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS63768	O95243	NM_003925.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000249910.1	MBD4-001	2470	580aa	ENSP00000249910.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3058	O95243	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507208.1	MBD4-009	2194	572aa	ENSP00000422327.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS63766	E9PEE4	NM_001276271.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000503197.1	MBD4-002	2099	540aa	ENSP00000424873.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS63767	O95243	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393278.2	MBD4-201	804	262aa	ENSP00000376959.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS63769	O95243	NM_001276273.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509828.1	MBD4-005	576	52aa	ENSP00000422690.1	Nonsense mediated decay		D6RBI7	-	-
ENST00000509587.1	MBD4-004	643	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505883.1	MBD4-006	613	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000511009.1	MBD4-010	530	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000515266.1	MBD4-007	434	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 530 bps,

Version

ENST00000511009.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000355982 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000511009.1 MBD4-010

Summary