Transcript: ENST00000261921.7 LOXL1-001

Description

lysyl oxidase-like 1 [Source:HGNC Symbol;Acc:6665]

Gene Synonyms

LOL, LOXL

Location

About this transcript

This transcript has 7 exons, is annotated with 21 domains and features, is associated with 11168 variant alleles and maps to 403 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261921.7	LOXL1-001	2351	574aa	ENSP00000261921.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10253	Q08397	NM_005576.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000566011.1	LOXL1-002	2786	431aa	ENSP00000457827.1	Nonsense mediated decay		H3BUV8	-	-
ENST00000567675.1	LOXL1-006	460	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000562548.1	LOXL1-005	1110	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000566530.1	LOXL1-003	557	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 2,351 bps, Translation length: 574 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q08397

CCDS

This transcript is a member of the Human CCDS set: CCDS10253

Version

ENST00000261921.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000268995 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.