Transcript: ENST00000358196.3 GAD1-001

Description

glutamate decarboxylase 1 (brain, 67kDa) [Source:HGNC Symbol;Acc:4092]

Gene Synonyms

CPSQ1, GAD, GAD67, SCP

Location

Chromosome 2: 171,673,072-171,717,661 forward strand.

About this transcript

This transcript has 17 exons, is annotated with 8 domains and features, is associated with 20076 variant alleles and maps to 743 oligo probes.

Gene

This transcript is a product of gene ENSG00000128683.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000358196.3	GAD1-001	3604	594aa	ENSP00000350928.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2239	C9J6C9 C9JLZ7 C9JN45 C9JT43 Q09LL7 Q99259	NM_000817.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375272.1	GAD1-201	1252	224aa	ENSP00000364421.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2240	C9J6C9 C9JLZ7 C9JN45 C9JT43 Q99259	NM_013445.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344257.5	GAD1-002	1029	224aa	ENSP00000341167.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2240	C9J6C9 C9JLZ7 C9JN45 C9JT43 Q99259	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000445006.1	GAD1-008	639	37aa	ENSP00000394948.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JN45	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000455008.1	GAD1-009	571	115aa	ENSP00000405917.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J6C9 C9JLZ7 C9JN45	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000456864.1	GAD1-010	556	121aa	ENSP00000394255.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J6C9 C9JLZ7 C9JN45 C9JT43	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000454603.1	GAD1-007	529	85aa	ENSP00000402366.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JLZ7 C9JN45	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000486850.1	GAD1-015	461	84aa	ENSP00000476147.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000493875.1	GAD1-003	3988	425aa	ENSP00000434696.1	Nonsense mediated decay		C9J6C9 C9JLZ7 C9JN45 C9JT43 Q49AK1	-	-
ENST00000414527.2	GAD1-013	1780	233aa	ENSP00000403849.1	Nonsense mediated decay		C9J6C9 C9JLZ7 C9JN45 C9JT43 F8WD43	-	-
ENST00000429023.1	GAD1-004	812	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478562.1	GAD1-006	3172	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000488724.1	GAD1-005	1256	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000493270.1	GAD1-012	807	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485013.1	GAD1-011	578	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000462739.1	GAD1-014	567	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 16, Transcript length: 3,604 bps, Translation length: 594 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99259

CCDS

This transcript is a member of the Human CCDS set: CCDS2239

Version

ENST00000358196.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000102664 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000358196.3 GAD1-001

Summary