Transcript: ENST00000561372.1 EMC4-008

Description

ER membrane protein complex subunit 4 [Source:HGNC Symbol;Acc:28032]

Gene Synonyms

FLJ90746, MGC24415, PIG17, TMEM85

Location

Chromosome 15: 34,517,226-34,520,047 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 1258 variant alleles and maps to 243 oligo probes.

Gene

This transcript is a product of gene ENSG00000128463.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000267750.4	EMC4-001	1036	183aa	ENSP00000267750.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10035	Q5J8M3	NM_016454.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557879.1	EMC4-011	1009	72aa	ENSP00000473881.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R329	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000249209.4	EMC4-003	852	149aa	ENSP00000249209.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS66732	Q5J8M3	NM_001286420.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560947.1	EMC4-014	709	98aa	ENSP00000452849.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000559078.1	EMC4-013	599	102aa	ENSP00000454052.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YNK8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559421.1	EMC4-012	497	78aa	ENSP00000452672.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YK61	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561372.1	EMC4-008	466	125aa	ENSP00000453287.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YLP8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000558205.1	EMC4-002	1006	84aa	ENSP00000454042.1	Nonsense mediated decay		H0YNK0	-	-
ENST00000560911.1	EMC4-007	579	72aa	ENSP00000453610.1	Nonsense mediated decay		H0YMH5	-	-
ENST00000558102.1	EMC4-009	543	43aa	ENSP00000453880.1	Nonsense mediated decay		H0YN63	-	-
ENST00000561246.1	EMC4-006	2019	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000557941.1	EMC4-005	1201	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000558810.1	EMC4-010	652	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 466 bps, Translation length: 125 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000561372.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000417979 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000561372.1 EMC4-008

Summary