Transcript: ENST00000248958.4 SDF2L1-001

Description

stromal cell-derived factor 2-like 1 [Source:HGNC Symbol;Acc:10676]

Gene Synonyms

AP000553.C22.4, OTTHUMT00000075032

Location

About this transcript

This transcript has 3 exons, is annotated with 16 domains and features, is associated with 1110 variant alleles and maps to 248 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000248958.4	SDF2L1-001	865	221aa	ENSP00000248958.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13792	Q9HCN8	NM_022044.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000466935.1	SDF2L1-002	601	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 865 bps, Translation length: 221 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9HCN8

CCDS

This transcript is a member of the Human CCDS set: CCDS13792

Version

ENST00000248958.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000320197 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.