Transcript: ENST00000381570.3 RNF6-002

Description

ring finger protein (C3H2C3 type) 6 [Source:HGNC Symbol;Acc:10069]

Gene Synonyms

DKFZp686P0776, SPG2

Location

Chromosome 13: 26,786,912-26,795,840 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 9 domains and features, is associated with 3693 variant alleles and maps to 464 oligo probes.

Gene

This transcript is a product of gene ENSG00000127870.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000381588.4	RNF6-006	3867	685aa	ENSP00000371000.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9316	Q9Y252	NM_005977.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381570.3	RNF6-002	3398	685aa	ENSP00000370982.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9316	Q9Y252	NM_183044.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000346166.3	RNF6-001	3276	685aa	ENSP00000342121.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9316	Q9Y252	NM_183043.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000399762.2	RNF6-201	1524	329aa	ENSP00000382665.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DDP0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000468480.1	RNF6-007	1105	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498039.1	RNF6-004	855	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476347.1	RNF6-005	633	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474280.1	RNF6-003	333	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 3,398 bps, Translation length: 685 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y252

CCDS

This transcript is a member of the Human CCDS set: CCDS9316

Version

ENST00000381570.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000044242 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000381570.3 RNF6-002

Summary