Transcript: ENST00000372561.3 PPCS-001

Description

phosphopantothenoylcysteine synthetase [Source:HGNC Symbol;Acc:25686]

Gene Synonyms

COAB, FLJ11838

Location

Chromosome 1: 42,922,230-42,926,085 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 9 domains and features, is associated with 1956 variant alleles and maps to 328 oligo probes.

Gene

This transcript is a product of gene ENSG00000127125.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372561.3	PPCS-001	1431	311aa	ENSP00000361642.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41311	Q9HAB8	NM_024664.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455780.1	PPCS-201	1044	138aa	ENSP00000389893.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41312	Q9HAB8	NM_001077447.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372556.3	PPCS-002	984	56aa	ENSP00000361637.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5VVM2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372562.1	PPCS-003	966	138aa	ENSP00000361643.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41312	Q9HAB8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372560.3	PPCS-005	793	213aa	ENSP00000361641.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5VVM3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472013.1	PPCS-007	1617	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469615.1	PPCS-004	778	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482168.1	PPCS-006	688	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471420.1	PPCS-008	641	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,431 bps, Translation length: 311 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9HAB8

CCDS

This transcript is a member of the Human CCDS set: CCDS41311

Version

ENST00000372561.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000019166 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000372561.3 PPCS-001

Summary