Transcript: ENST00000372172.4 HECTD3-001

Description

HECT domain containing E3 ubiquitin protein ligase 3 [Source:HGNC Symbol;Acc:26117]

Gene Synonyms

FLJ21156, RP11-69J16.1

Location

Chromosome 1: 45,468,212-45,477,001 reverse strand.

About this transcript

This transcript has 21 exons, is annotated with 11 domains and features, is associated with 4897 variant alleles and maps to 594 oligo probes.

Gene

This transcript is a product of gene ENSG00000126107.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372172.4	HECTD3-001	3610	861aa	ENSP00000361245.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41318	A1A4G1 Q5T447	NM_024602.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372168.3	HECTD3-002	2530	471aa	ENSP00000361241.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T447	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000486132.1	HECTD3-005	2385	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466423.1	HECTD3-003	914	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486296.1	HECTD3-004	812	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487488.1	HECTD3-006	593	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484564.1	HECTD3-007	314	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 3,610 bps, Translation length: 861 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5T447

CCDS

This transcript is a member of the Human CCDS set: CCDS41318

Version

ENST00000372172.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000023734 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000372172.4 HECTD3-001

Summary