Transcript: ENST00000372242.3 TMEM53-007

Description

transmembrane protein 53 [Source:HGNC Symbol;Acc:26186]

Gene Synonyms

FLJ22353, NET4

Location

Chromosome 1: 45,100,910-45,140,131 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 16423 variant alleles and maps to 281 oligo probes.

Gene

This transcript is a product of gene ENSG00000126106.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372237.3	TMEM53-001	2310	277aa	ENSP00000361311.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS511	B4DI10 Q6P2H8	NM_024587.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372242.3	TMEM53-007	1846	201aa	ENSP00000361316.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TDE5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372243.3	TMEM53-003	1579	111aa	ENSP00000361317.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TDE6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372244.3	TMEM53-005	1472	78aa	ENSP00000361318.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TDE4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372235.3	TMEM53-008	890	247aa	ENSP00000361309.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DI10 Q5TDE2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000420706.1	TMEM53-009	415	134aa	ENSP00000391576.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TDE3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000476724.1	TMEM53-002	2075	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468117.1	TMEM53-004	2017	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495630.1	TMEM53-006	546	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,846 bps, Translation length: 201 residues

Version

ENST00000372242.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000021605 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000372242.3 TMEM53-007

Summary