Transcript: ENST00000338121.5 GZF1-003

Description

GDNF-inducible zinc finger protein 1 [Source:HGNC Symbol;Acc:15808]

Gene Synonyms

ZBTB23, ZNF336, dJ322G13.2

Location

Chromosome 20: 23,342,819-23,353,700 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 66 domains and features, is associated with 5323 variant alleles and maps to 508 oligo probes.

Gene

This transcript is a product of gene ENSG00000125812.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000338121.5	GZF1-003	4835	711aa	ENSP00000338290.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13151	B4DF58 F5H2R0 Q5JXG1 Q9H116	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377051.2	GZF1-201	4740	711aa	ENSP00000366250.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13151	B4DF58 F5H2R0 Q5JXG1 Q9H116	NM_022482.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544236.1	GZF1-203	989	235aa	ENSP00000445458.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DF58 F5H2R0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542987.1	GZF1-202	951	220aa	ENSP00000445118.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DF58	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424216.1	GZF1-004	795	48aa	ENSP00000410009.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JXG1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000461789.1	GZF1-002	675	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477239.1	GZF1-001	390	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 4,835 bps, Translation length: 711 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H116

CCDS

This transcript is a member of the Human CCDS set: CCDS13151

Version

ENST00000338121.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000078333 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000338121.5 GZF1-003

Summary