Transcript: ENST00000430715.2 RTN2-006

Description

reticulon 2 [Source:HGNC Symbol;Acc:10468]

Gene Synonyms

NSP2, NSPL1, NSPLI, SPG12

Location

Chromosome 19: 45,988,552-45,996,525 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 9 domains and features, is associated with 4457 variant alleles and maps to 352 oligo probes.

Gene

This transcript is a product of gene ENSG00000125744.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000590526.1	RTN2-005	2357	271aa	ENSP00000466619.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EMR7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000245923.4	RTN2-001	2293	545aa	ENSP00000245923.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12665	K7EMR7 O75298	NM_005619.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344680.4	RTN2-003	2063	472aa	ENSP00000345127.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12666	O75298	NM_206900.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430715.2	RTN2-006	1127	205aa	ENSP00000398178.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46114	O75298	NM_206901.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587597.1	RTN2-002	2212	461aa	ENSP00000468144.1	Nonsense mediated decay		Q7RTN0	-	-
ENST00000591286.1	RTN2-004	2111	276aa	ENSP00000467863.1	Nonsense mediated decay		Q96CG9	-	-
ENST00000589384.1	RTN2-007	589	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000588036.1	RTN2-010	546	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000590746.1	RTN2-011	228	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000592064.1	RTN2-008	915	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000591789.1	RTN2-013	682	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000593129.1	RTN2-012	526	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000589628.1	RTN2-009	435	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000593187.1	RTN2-014	299	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,127 bps, Translation length: 205 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75298

CCDS

This transcript is a member of the Human CCDS set: CCDS46114

Version

ENST00000430715.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000459575 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000430715.2 RTN2-006

Summary