Transcript: ENST00000558961.1 BMP4-007

Description

bone morphogenetic protein 4 [Source:HGNC Symbol;Acc:1071]

Gene Synonyms

BMP2B, BMP2B1, DVR4, MCOPS6, OFC11, ZYME

Location

Chromosome 14: 54,417,340-54,418,865 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 3 domains and features, is associated with 877 variant alleles and maps to 78 oligo probes.

Gene

This transcript is a product of gene ENSG00000125378.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000245451.4	BMP4-001	1917	408aa	ENSP00000245451.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9715	H0YLW3 H0YM53 P12644 Q53XC5 U3MVU6	NM_001202.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000417573.1	BMP4-201	1784	408aa	ENSP00000394165.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9715	H0YLW3 H0YM53 P12644 Q53XC5 U3MVU6	NM_130851.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559087.1	BMP4-002	1708	408aa	ENSP00000453485.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9715	H0YLW3 H0YM53 P12644 Q53XC5 U3MVU6	NM_130850.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558984.1	BMP4-003	1705	408aa	ENSP00000454134.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9715	H0YLW3 H0YM53 P12644 Q53XC5 U3MVU6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559501.1	BMP4-006	1112	271aa	ENSP00000453365.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YLW3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000559642.1	BMP4-004	505	110aa	ENSP00000453467.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YM53	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000558961.1	BMP4-007	495	104aa	ENSP00000453691.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YMP9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000609748.1	BMP4-008	458	29aa	ENSP00000476690.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000558489.1	BMP4-005	605	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 495 bps, Translation length: 104 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000558961.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Stop codons

This transcript has a variant, rs17563, that causes a stop codon to be lost in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HAPMAP-GIH, CSHL-HAPMAP:HapMap-HCB, CSHL-HAPMAP:HAPMAP-MEX, CSHL-HAPMAP:HAPMAP-CHB, CSHL-HAPMAP:HAPMAP-ASW, CSHL-HAPMAP:HapMap-CEU, CSHL-HAPMAP:HAPMAP-TSI, ESP6500:African_American, CSHL-HAPMAP:HAPMAP-CHD, ESP6500:European_American, CSHL-HAPMAP:HapMap-JPT, CSHL-HAPMAP:HapMap-YRI, CSHL-HAPMAP:HAPMAP-MKK, CSHL-HAPMAP:HAPMAP-LWK.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000417541 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000558961.1 BMP4-007

Summary