EMBL-EBI User Survey 2024

Do data resources managed by EMBL-EBI and our collaborators make a difference to your work?

Please take 10 minutes to fill in our annual user survey, and help us make the case for why sustaining open data resources is critical for life sciences research.

Survey link: https://www.surveymonkey.com/r/HJKYKTT?channel=[webpage]

Human (GRCh37.p13)
Description

septin 6 [Source:HGNC Symbol;Acc:15848]

Gene Synonyms

KIAA0128, MGC16619, MGC20339, SEP2, SEPT2

About this transcript

This transcript has 11 exons, is annotated with 12 domains and features, is associated with 24112 variant alleles and maps to 298 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000343984.5SEPT6-0012693434aaENSP00000341524.5
 
Protein coding
CCDS14584Q14141 Q541S4 NM_015129.5Ensembl CanonicalGENCODE basic
ENST00000394610.1SEPT6-2014694427aaENSP00000378108.1
 
Protein coding
CCDS14585Q14141 Q541S4 NM_145799.3GENCODE basic
ENST00000354416.3SEPT6-0024652431aaENSP00000346397.3
 
Protein coding
B1AMS2 Q541S4 -GENCODE basic
ENST00000360156.7SEPT6-0062609427aaENSP00000353278.7
 
Protein coding
CCDS14585Q14141 Q541S4 NM_145802.3GENCODE basic
ENST00000394616.4SEPT6-2021859369aaENSP00000378114.4
 
Protein coding
B4E049 -GENCODE basic
ENST00000394617.2SEPT6-2031720457aaENSP00000378115.2
 
Protein coding
B4E049 F5H1J5 -GENCODE basic
ENST00000489216.1SEPT6-0031617427aaENSP00000418715.1
 
Protein coding
CCDS14585Q14141 Q541S4 -GENCODE basic
ENST00000354228.4SEPT6-0041576429aaENSP00000346169.4
 
Protein coding
CCDS14583Q14141 Q541S4 Q548C9
-GENCODE basic
ENST00000460411.1SEPT6-0051393267aaENSP00000435818.1
 
Nonsense mediated decay
Q14141 --
ENST00000467310.1SEPT6-0071061No protein-
 
Processed transcript
---
ENST00000481072.1SEPT6-008836No protein-
 
Processed transcript
---
Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,617 bps, Translation length: 427 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14141

CCDS

This transcript is a member of the Human CCDS set: CCDS14585

Version

ENST00000489216.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000058061 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.