Transcript: ENST00000372922.4 TRERF1-001

Description

transcriptional regulating factor 1 [Source:HGNC Symbol;Acc:18273]

Gene Synonyms

BCAR2, HSA277276, RAPA, RP1-139D8.5, TREP132, TReP-132, dJ139D8.5

Location

About this transcript

This transcript has 18 exons, is annotated with 40 domains and features, is associated with 93877 variant alleles and maps to 893 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000541110.1	TRERF1-202	7646	1220aa	ENSP00000439689.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q05GC8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372917.4	TRERF1-201	7373	1129aa	ENSP00000362008.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96PN7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372922.4	TRERF1-001	7286	1200aa	ENSP00000362013.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4867	Q96PN7	NM_033502.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000340840.2	TRERF1-002	4174	1129aa	ENSP00000339438.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96PN7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354325.2	TRERF1-003	4138	1117aa	ENSP00000346285.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96PN7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 18, Coding exons: 14, Transcript length: 7,286 bps, Translation length: 1,200 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96PN7

CCDS

This transcript is a member of the Human CCDS set: CCDS4867

Version

ENST00000372922.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000040551 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.