Transcript: ENST00000479211.1 F13A1-005

Description

coagulation factor XIII, A1 polypeptide [Source:HGNC Symbol;Acc:3531]

Gene Synonyms

F13A

Location

Chromosome 6: 6,251,140-6,305,887 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 23474 variant alleles and maps to 86 oligo probes.

Gene

This transcript is a product of gene ENSG00000124491.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264870.3	F13A1-001	3999	732aa	ENSP00000264870.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4496	P00488 Q9NQP5	NM_000129.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000451619.1	F13A1-006	631	147aa	ENSP00000411114.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2H0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000431222.2	F13A1-004	592	185aa	ENSP00000416295.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2H0 A6PVK5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000414279.1	F13A1-003	582	138aa	ENSP00000413334.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9NQP5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000445223.1	F13A1-002	454	102aa	ENSP00000394693.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000479211.1	F13A1-005	579	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 579 bps,

Version

ENST00000479211.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000317458 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000479211.1 F13A1-005

Summary