Transcript: ENST00000460621.1 VAMP7-006

Description

vesicle-associated membrane protein 7 [Source:HGNC Symbol;Acc:11486]

Gene Synonyms

SYBL1, TI-VAMP, TIVAMP, VAMP-7

Location

About this transcript

This transcript has 7 exons, is annotated with 15 domains and features, is associated with 25840 variant alleles and maps to 455 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000286448.6	VAMP7-002	2646	220aa	ENSP00000286448.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14770	B4DMB4 P51809	NM_005638.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000262640.6	VAMP7-001	2496	260aa	ENSP00000262640.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55548	P51809	NM_001185183.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000460621.1	VAMP7-006	658	179aa	ENSP00000427822.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48199	B4DMB4 P51809	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000488344.1	VAMP7-005	696	59aa	ENSP00000430039.1	Nonsense mediated decay		E5RH06	-	-
ENST00000479687.1	VAMP7-003	742	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463317.1	VAMP7-004	673	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 658 bps, Translation length: 179 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P51809

CCDS

This transcript is a member of the Human CCDS set: CCDS48199

Version

ENST00000460621.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000058847 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.