Transcript: ENST00000510525.1 MTRR-004

Description

5-methyltetrahydrofolate-homocysteine methyltransferase reductase [Source:HGNC Symbol;Acc:7473]

Gene Synonyms

MSR, cblE

Location

Chromosome 5: 7,870,883-7,901,229 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 15 domains and features, is associated with 14974 variant alleles and maps to 592 oligo probes.

Gene

This transcript is a product of gene ENSG00000124275.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264668.2	MTRR-001	3274	725aa	ENSP00000264668.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3874	D6RAZ2 D6RGC7 D6RIS8 Q9UBK8	NM_024010.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000440940.2	MTRR-009	3215	698aa	ENSP00000402510.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47190	D6RAZ2 D6RGC7 D6RIS8 Q9UBK8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000341013.6	MTRR-201	1128	58aa	ENSP00000341918.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RIS8 Q9UBK8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506877.1	MTRR-013	628	41aa	ENSP00000427416.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RIS8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000502550.1	MTRR-012	567	156aa	ENSP00000424599.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAZ2 D6RGC7 D6RIS8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000512217.1	MTRR-014	520	112aa	ENSP00000421318.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RGC7 D6RIS8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000514220.1	MTRR-010	478	160aa	ENSP00000423863.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000510525.1	MTRR-004	3091	372aa	ENSP00000421991.1	Nonsense mediated decay		D6RAZ2 D6RGC7 D6RIS8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000511461.1	MTRR-003	3076	81aa	ENSP00000424719.1	Nonsense mediated decay		D6RIS8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000513439.1	MTRR-002	2441	92aa	ENSP00000426710.1	Nonsense mediated decay		D6RF21 D6RIS8	-	-
ENST00000514369.1	MTRR-016	779	58aa	ENSP00000426132.1	Nonsense mediated decay		D6RIS8 Q9UBK8	-	-
ENST00000503550.1	MTRR-017	556	46aa	ENSP00000424644.1	Nonsense mediated decay		D6RAY3 D6RIS8	-	-
ENST00000510279.1	MTRR-008	546	58aa	ENSP00000427200.1	Nonsense mediated decay		D6RIS8 Q9UBK8	-	-
ENST00000508047.1	MTRR-011	535	115aa	ENSP00000423139.1	Nonsense mediated decay		D6RF21 D6RIS8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000502509.1	MTRR-005	711	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000511639.1	MTRR-007	690	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000506115.1	MTRR-023	620	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000508101.1	MTRR-018	584	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000507837.1	MTRR-006	574	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000509961.1	MTRR-019	492	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000509379.1	MTRR-024	455	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000507414.1	MTRR-025	441	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000508354.1	MTRR-022	556	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000507202.1	MTRR-021	495	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000512311.1	MTRR-020	386	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000508890.1	MTRR-015	346	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 7, Transcript length: 3,091 bps, Translation length: 372 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000510525.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000366328 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000510525.1 MTRR-004

Summary