Transcript: ENST00000608944.1 SLC12A5-005

Description

solute carrier family 12 (potassium/chloride transporter), member 5 [Source:HGNC Symbol;Acc:13818]

Gene Synonyms

KCC2, KIAA1176

Location

Chromosome 20: 44,657,648-44,665,444 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 6 domains and features, is associated with 4001 variant alleles and maps to 66 oligo probes.

Gene

This transcript is a product of gene ENSG00000124140.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000243964.3	SLC12A5-002	5989	1116aa	ENSP00000243964.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13391	B7Z3I0 Q5VZ42 Q9H2X9	NM_020708.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000454036.2	SLC12A5-003	3566	1139aa	ENSP00000387694.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46610	B7Z3I0 Q9H2X9	NM_001134771.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372315.1	SLC12A5-001	1549	285aa	ENSP00000361389.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5VZ42	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000608944.1	SLC12A5-005	560	111aa	ENSP00000476885.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539566.1	SLC12A5-004	1105	186aa	ENSP00000446091.1	Nonsense mediated decay		B7Z3T3	-	-
ENST00000413737.1	SLC12A5-008	400	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000608594.1	SLC12A5-006	359	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000428198.1	SLC12A5-007	248	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 560 bps, Translation length: 111 residues

Version

ENST00000608944.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000471541 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000608944.1 SLC12A5-005

Summary