Transcript: ENST00000242261.5 TWIST1-001

Description

twist family bHLH transcription factor 1 [Source:HGNC Symbol;Acc:12428]

Gene Synonyms

ACS3, BHLHA38, BPES2, BPES3, CRS1, H-twist, SCS, TWIST, bHLHa38

Location

About this transcript

This transcript has 2 exons, is annotated with 10 domains and features, is associated with 1947 variant alleles and maps to 284 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000242261.5	TWIST1-001	1666	202aa	ENSP00000242261.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5367	Q15672	NM_000474.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354571.5	TWIST1-003	589	135aa	ENSP00000346582.5	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000443687.1	TWIST1-002	527	70aa	ENSP00000416986.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 1,666 bps, Translation length: 202 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15672

CCDS

This transcript is a member of the Human CCDS set: CCDS5367

Version

ENST00000242261.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000207625 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.