Transcript: ENST00000310944.6 LDB3-202

Description

LIM domain binding 3 [Source:HGNC Symbol;Acc:15710]

Gene Synonyms

CMD1C, CYPHER, KIAA0613, LDB3Z1, LDB3Z4, LVNC3, MFM4, ORACLE, PDLIM6, ZASP

Location

Chromosome 10: 88,428,426-88,459,810 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 10 domains and features, is associated with 14491 variant alleles and maps to 270 oligo probes.

Gene

This transcript is a product of gene ENSG00000122367.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000429277.2	LDB3-205	5436	732aa	ENSP00000401437.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53550	O75112	NM_001171610.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361373.4	LDB3-001	5297	727aa	ENSP00000355296.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7377	O75112	NM_007078.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000458213.2	LDB3-206	5091	617aa	ENSP00000409148.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41544	O75112	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000263066.6	LDB3-201	4966	617aa	ENSP00000263066.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41544	O75112	NM_001080114.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000352360.5	LDB3-203	4650	470aa	ENSP00000263067.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O75112	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372056.4	LDB3-204	1899	398aa	ENSP00000361126.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53549	O75112	NM_001171611.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542786.1	LDB3-207	1889	231aa	ENSP00000438866.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O75112	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000310944.6	LDB3-202	1695	330aa	ENSP00000311913.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44450	B4DND5 O75112	NM_001080115.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372066.3	LDB3-002	1598	283aa	ENSP00000361136.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41545	B4DUL3 O75112	NM_001080116.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000477489.1	LDB3-005	433	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,695 bps, Translation length: 330 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75112

CCDS

This transcript is a member of the Human CCDS set: CCDS44450

Version

ENST00000310944.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000310944.6 LDB3-202

Summary