Transcript: ENST00000502798.2 SV2C-001

Description

synaptic vesicle glycoprotein 2C [Source:HGNC Symbol;Acc:30670]

Gene Synonyms

KIAA1054

Location

About this transcript

This transcript has 13 exons, is annotated with 31 domains and features, is associated with 103336 variant alleles and maps to 638 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000502798.2	SV2C-001	7158	727aa	ENSP00000423541.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43331	Q496J9	NM_014979.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000322285.7	SV2C-002	3010	676aa	ENSP00000316983.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KT41	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506257.1	SV2C-004	437	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 7,158 bps, Translation length: 727 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q496J9

CCDS

This transcript is a member of the Human CCDS set: CCDS43331

Version

ENST00000502798.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000368700 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.