Transcript: ENST00000241393.3 CXCR4-001

Description

chemokine (C-X-C motif) receptor 4 [Source:HGNC Symbol;Acc:2561]

Gene Synonyms

CD184, D2S201E, FB22, HM89, HSY3RR, LAP3, LCR1, LESTR, NPY3R, NPYR, NPYRL, NPYY3R, WHIM, fusin

Location

About this transcript

This transcript has 2 exons, is annotated with 38 domains and features, is associated with 3131 variant alleles and maps to 454 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000409817.1	CXCR4-003	1895	356aa	ENSP00000386884.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33295	P61073 Q5MIL4	NM_001008540.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000241393.3	CXCR4-001	1682	352aa	ENSP00000241393.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46420	P61073 Q5MIL4	NM_003467.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000466288.1	CXCR4-002	1485	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 1,682 bps, Translation length: 352 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P61073

CCDS

This transcript is a member of the Human CCDS set: CCDS46420

Version

ENST00000241393.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000331732 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.