Transcript: ENST00000369763.4 LRIF1-001

Description

ligand dependent nuclear receptor interacting factor 1 [Source:HGNC Symbol;Acc:30299]

Gene Synonyms

C1orf103, FLJ11269, RIF1, RP11-96K19.1

Location

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 8565 variant alleles and maps to 344 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369763.4	LRIF1-001	3475	769aa	ENSP00000358778.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30800	Q5T3J3	NM_018372.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000494675.1	LRIF1-002	1912	233aa	ENSP00000435259.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41366	Q5T3J3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000485275.2	LRIF1-003	1796	233aa	ENSP00000432290.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41366	Q5T3J3	NM_001006945.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 3,475 bps, Translation length: 769 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5T3J3

CCDS

This transcript is a member of the Human CCDS set: CCDS30800

Version

ENST00000369763.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000032932 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.