Transcript: ENST00000586984.2 CEP89-004

Description

centrosomal protein 89kDa [Source:HGNC Symbol;Acc:25907]

Gene Synonyms

CCDC123, CEP123, FLJ14640

Location

Chromosome 19: 33,369,915-33,462,861 reverse strand.

About this transcript

This transcript has 18 exons, is annotated with 8 domains and features, is associated with 39103 variant alleles and maps to 630 oligo probes.

Gene

This transcript is a product of gene ENSG00000121289.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000305768.5	CEP89-001	2607	783aa	ENSP00000306105.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32987	Q96ST8	NM_032816.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000590597.2	CEP89-005	1340	356aa	ENSP00000466442.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96ST8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000593276.2	CEP89-006	682	217aa	ENSP00000467839.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000586984.2	CEP89-004	2482	428aa	ENSP00000465141.1	Nonsense mediated decay		K7EJF0	-	-
ENST00000591698.1	CEP89-002	2367	173aa	ENSP00000467544.1	Nonsense mediated decay		K7EPU8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000591863.1	CEP89-010	2903	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000592401.1	CEP89-008	558	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000591205.1	CEP89-007	596	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 13, Transcript length: 2,482 bps, Translation length: 428 residues

Version

ENST00000586984.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000451302 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000586984.2 CEP89-004

Summary