Transcript: ENST00000498166.1 GORAB-004

Description

golgin, RAB6-interacting [Source:HGNC Symbol;Acc:25676]

Gene Synonyms

FLJ11752, GO, NTKL-BP1, NTKLBP1, SCYL1BP1

Location

About this transcript

This transcript has 7 exons, is annotated with 2 domains and features, is associated with 9352 variant alleles and maps to 442 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367763.3	GORAB-001	2189	394aa	ENSP00000356737.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1289	Q5T7V8	NM_152281.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367762.1	GORAB-002	1699	246aa	ENSP00000356736.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53428	Q5T7V8	NM_001146039.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000498166.1	GORAB-004	2467	126aa	ENSP00000473336.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000465717.1	GORAB-006	597	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498600.2	GORAB-005	2185	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475113.1	GORAB-007	468	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 3, Transcript length: 2,467 bps, Translation length: 126 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000498166.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000085229 (version 2)