Transcript: ENST00000239243.6 MSX2-001

Description

msh homeobox 2 [Source:HGNC Symbol;Acc:7392]

Gene Synonyms

CRS2, FPP, HOX8, MSH, PFM, PFM1

Location

About this transcript

This transcript has 2 exons, is annotated with 14 domains and features, is associated with 3451 variant alleles and maps to 422 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000239243.6	MSX2-001	2241	267aa	ENSP00000239243.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4392	P35548	NM_002449.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507785.1	MSX2-002	618	134aa	ENSP00000427425.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RIS4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 2,241 bps, Translation length: 267 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P35548

CCDS

This transcript is a member of the Human CCDS set: CCDS4392

Version

ENST00000239243.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000252981 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.