Transcript: ENST00000474985.1 FAM98A-002

Description

family with sequence similarity 98, member A [Source:HGNC Symbol;Acc:24520]

Gene Synonyms

DKFZP564F0522

Location

Chromosome 2: 33,808,729-33,814,915 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 2963 variant alleles and maps to 392 oligo probes.

Gene

This transcript is a product of gene ENSG00000119812.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000403368.1	FAM98A-004	2818	312aa	ENSP00000384711.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J3G8 E9PH82	NM_015475.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000238823.8	FAM98A-001	2816	518aa	ENSP00000238823.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33179	B4DT23 C9J3G8 Q8NCA5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441530.2	FAM98A-201	1539	323aa	ENSP00000408716.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DT23	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431950.1	FAM98A-009	260	68aa	ENSP00000398490.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J3G8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000498340.1	FAM98A-007	489	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474985.1	FAM98A-002	3546	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475122.1	FAM98A-010	1032	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464415.1	FAM98A-006	655	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492649.1	FAM98A-011	603	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 3,546 bps,

Version

ENST00000474985.1

Type

Retained intron

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000325499 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000474985.1 FAM98A-002

Summary