Transcript: ENST00000261980.2 VSX2-001

Description

visual system homeobox 2 [Source:HGNC Symbol;Acc:1975]

Gene Synonyms

CHX10, HOX10, MCOP2, MCOPCB3, RET1

Location

About this transcript

This transcript has 5 exons, is annotated with 15 domains and features, is associated with 12394 variant alleles and maps to 241 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261980.2	VSX2-001	2995	361aa	ENSP00000261980.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9827	P58304	NM_182894.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,995 bps, Translation length: 361 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P58304

CCDS

This transcript is a member of the Human CCDS set: CCDS9827

Version

ENST00000261980.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000412323 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.