Transcript: ENST00000373547.4 PPP6C-001

Description

protein phosphatase 6, catalytic subunit [Source:HGNC Symbol;Acc:9323]

Gene Synonyms

PP6, PP6C, PPP6

Location

Chromosome 9: 127,908,852-127,952,097 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 14 domains and features, is associated with 20978 variant alleles and maps to 713 oligo probes.

Gene

This transcript is a product of gene ENSG00000119414.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000451402.1	PPP6C-203	4349	342aa	ENSP00000392147.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48018	B7Z3E2 O00743	NM_001123355.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415905.1	PPP6C-202	4172	283aa	ENSP00000411744.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48019	B7Z3E2 O00743	NM_001123369.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373547.4	PPP6C-001	4118	305aa	ENSP00000362648.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6861	B7Z3E2 O00743	NM_002721.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373546.3	PPP6C-201	960	158aa	ENSP00000362647.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z3E2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456642.1	PPP6C-002	569	125aa	ENSP00000416287.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T1S7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 4,118 bps, Translation length: 305 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O00743

CCDS

This transcript is a member of the Human CCDS set: CCDS6861

Version

ENST00000373547.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000054060 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000373547.4 PPP6C-001

Summary