Transcript: ENST00000399728.1 STMN1-201

Description

stathmin 1 [Source:HGNC Symbol;Acc:6510]

Gene Synonyms

C1orf215, FLJ32206, LAP18, Lag, OP18, PP17, PP19, PR22, SMN

Location

Chromosome 1: 26,226,609-26,232,644 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 14 domains and features, is associated with 2837 variant alleles and maps to 495 oligo probes.

Gene

This transcript is a product of gene ENSG00000117632.16 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000399728.1	STMN1-201	1712	149aa	ENSP00000382633.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS269	A2A2D0 P16949	NM_203401.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455785.2	STMN1-001	1504	149aa	ENSP00000387858.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS269	A2A2D0 P16949	NM_203399.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357865.2	STMN1-003	1137	149aa	ENSP00000350531.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS269	A2A2D0 P16949	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000426559.2	STMN1-008	948	174aa	ENSP00000410452.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44090	A2A2D0 P16949	NM_001145454.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374291.1	STMN1-005	867	149aa	ENSP00000363409.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS269	A2A2D0 P16949	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446334.1	STMN1-004	665	85aa	ENSP00000407567.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A2D0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000465604.1	STMN1-002	2947	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513116.1	STMN1-009	1783	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485226.1	STMN1-007	449	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,712 bps, Translation length: 149 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P16949

CCDS

This transcript is a member of the Human CCDS set: CCDS269

Version

ENST00000399728.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript having same CDS:	OTTHUMT00000019357 (version 1) OTTHUMT00000019355 (version 1) OTTHUMT00000019359 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000399728.1 STMN1-201

Summary