Transcript: ENST00000236137.5 SLC19A2-001

Description

solute carrier family 19 (thiamine transporter), member 2 [Source:HGNC Symbol;Acc:10938]

Gene Synonyms

TC1, THMD1, THT1, THTR1, TRMA

Location

About this transcript

This transcript has 6 exons, is annotated with 22 domains and features, is associated with 8874 variant alleles and maps to 394 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000236137.5	SLC19A2-001	3671	497aa	ENSP00000236137.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1280	O60779	NM_006996.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367804.4	SLC19A2-002	2976	296aa	ENSP00000356778.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O60779	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 3,671 bps, Translation length: 497 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O60779

CCDS

This transcript is a member of the Human CCDS set: CCDS1280

Version

ENST00000236137.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000086106 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.