Transcript: ENST00000367362.3 NR5A2-001

Description

nuclear receptor subfamily 5, group A, member 2 [Source:HGNC Symbol;Acc:7984]

Gene Synonyms

B1F, B1F2, CPF, FTF, FTZ-F1, FTZ-F1beta, LRH-1, LRH1, hB1F, hB1F-2

Location

Chromosome 1: 199,996,730-200,146,552 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 23 domains and features, is associated with 64150 variant alleles and maps to 624 oligo probes.

Gene

This transcript is a product of gene ENSG00000116833.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367362.3	NR5A2-001	5086	541aa	ENSP00000356331.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1401	B4E2P3 O00482 Q8WY08	NM_205860.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000236914.3	NR5A2-003	3115	495aa	ENSP00000236914.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1400	B4E2P3 F1D8R9 O00482 Q8WY08	NM_003822.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544748.1	NR5A2-201	1852	469aa	ENSP00000439116.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60383	B4E2P3	NM_001276464.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367357.3	NR5A2-005	1793	377aa	ENSP00000356326.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000447034.1	NR5A2-004	213	71aa	ENSP00000414888.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9Y5V6	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000474307.1	NR5A2-002	1713	113aa	ENSP00000436776.1	Nonsense mediated decay		E9PQH2 Q8WY08	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 5,086 bps, Translation length: 541 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O00482

CCDS

This transcript is a member of the Human CCDS set: CCDS1401

Version

ENST00000367362.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000086497 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000367362.3 NR5A2-001

Summary