Transcript: ENST00000477427.1 ASH1L-005

Description

ash1 (absent, small, or homeotic)-like (Drosophila) [Source:HGNC Symbol;Acc:19088]

Gene Synonyms

ASH1, ASH1L1, KIAA1420, KMT2H, huASH1

Location

Chromosome 1: 155,339,938-155,340,659 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 331 variant alleles and maps to 61 oligo probes.

Gene

This transcript is a product of gene ENSG00000116539.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000368346.3	ASH1L-001	11942	2969aa	ENSP00000357330.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9NR48	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392403.3	ASH1L-002	10979	2964aa	ENSP00000376204.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1113	Q9NR48	NM_018489.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000548830.1	ASH1L-006	1862	177aa	ENSP00000449283.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VWK7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000492987.2	ASH1L-004	784	154aa	ENSP00000448820.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000478837.1	ASH1L-003	723	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000477427.1	ASH1L-005	596	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000548566.1	ASH1L-007	584	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 596 bps,

Version

ENST00000477427.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000039404 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000477427.1 ASH1L-005

Summary