Transcript: ENST00000495118.1 ATP6V1B1-009

Description

ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1 [Source:HGNC Symbol;Acc:853]

Gene Synonyms

ATP6B1, RTA1B, VATB, VMA2, VPP3, Vma2

Location

Chromosome 2: 71,187,069-71,188,950 forward strand.

About this transcript

This transcript has 3 exons, is associated with 896 variant alleles and maps to 122 oligo probes.

Gene

This transcript is a product of gene ENSG00000116039.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000234396.4	ATP6V1B1-001	1891	513aa	ENSP00000234396.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1912	B4DWH7 C9JTN0 C9JZ02 P15313 Q71UA2	NM_001692.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000412314.1	ATP6V1B1-005	1805	496aa	ENSP00000388353.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JL73 C9JTN0 C9JZ02	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000454446.1	ATP6V1B1-007	863	249aa	ENSP00000408361.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JNS9 C9JTN0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000432098.1	ATP6V1B1-006	546	74aa	ENSP00000387599.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JTN0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000433895.1	ATP6V1B1-010	472	118aa	ENSP00000407840.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JZ02	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000432367.1	ATP6V1B1-004	1905	248aa	ENSP00000405114.1	Nonsense mediated decay		C9J5E3 C9JTN0	-	-
ENST00000463380.1	ATP6V1B1-008	574	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000495118.1	ATP6V1B1-009	467	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 467 bps,

Version

ENST00000495118.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000332238 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000495118.1 ATP6V1B1-009

Summary