Transcript: ENST00000472748.1 SLC25A12-009

Description

solute carrier family 25 (aspartate/glutamate carrier), member 12 [Source:HGNC Symbol;Acc:10982]

Gene Synonyms

AGC1, ARALAR, ARALAR1, Aralar

Location

Chromosome 2: 172,700,879-172,864,762 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 67372 variant alleles and maps to 112 oligo probes.

Gene

This transcript is a product of gene ENSG00000115840.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000422440.2	SLC25A12-001	2979	678aa	ENSP00000388658.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33327	O75746	NM_003705.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392592.4	SLC25A12-201	2429	571aa	ENSP00000376371.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KR64	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000263812.4	SLC25A12-006	2429	87aa	ENSP00000263812.4	Nonsense mediated decay		F8W9J0	-	-
ENST00000426896.1	SLC25A12-007	911	210aa	ENSP00000413968.1	Nonsense mediated decay		B4DGK6	-	-
ENST00000475360.2	SLC25A12-003	829	175aa	ENSP00000437845.1	Nonsense mediated decay		H0YFB2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000472748.1	SLC25A12-009	630	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484227.1	SLC25A12-008	556	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464063.1	SLC25A12-010	553	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494892.1	SLC25A12-005	319	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472070.1	SLC25A12-002	1889	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485880.1	SLC25A12-004	552	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 630 bps,

Version

ENST00000472748.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000334724 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000472748.1 SLC25A12-009

Summary