Transcript: ENST00000473122.1 ST3GAL5-010

Description

ST3 beta-galactoside alpha-2,3-sialyltransferase 5 [Source:HGNC Symbol;Acc:10872]

Gene Synonyms

SATI, SIAT9, SIATGM3S, ST3GalV

Location

Chromosome 2: 86,078,631-86,116,000 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 14738 variant alleles and maps to 176 oligo probes.

Gene

This transcript is a product of gene ENSG00000115525.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000377332.3	ST3GAL5-001	2366	418aa	ENSP00000366549.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1986	C9JYS9 Q9UNP4	NM_003896.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393805.1	ST3GAL5-003	2318	390aa	ENSP00000377394.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JYS9 Q9UNP4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393808.3	ST3GAL5-002	2225	395aa	ENSP00000377397.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42705	C9JYS9 Q9UNP4	NM_001042437.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000525834.2	ST3GAL5-201	989	220aa	ENSP00000433607.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V199	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455892.1	ST3GAL5-004	530	139aa	ENSP00000401375.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JYS9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000306262.5	ST3GAL5-012	915	112aa	ENSP00000306247.5	Nonsense mediated decay		E7EPY0	-	-
ENST00000433665.1	ST3GAL5-006	640	47aa	ENSP00000408635.1	Nonsense mediated decay		F8WEA8	-	-
ENST00000484728.1	ST3GAL5-011	583	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461892.1	ST3GAL5-007	553	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487896.1	ST3GAL5-009	538	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461199.1	ST3GAL5-008	513	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473122.1	ST3GAL5-010	486	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490946.1	ST3GAL5-005	467	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461206.1	ST3GAL5-013	3487	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 486 bps,

Version

ENST00000473122.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000329826 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000473122.1 ST3GAL5-010

Summary