Transcript: ENST00000465183.1 TXNDC9-007

Description

thioredoxin domain containing 9 [Source:HGNC Symbol;Acc:24110]

Gene Synonyms

APACD, PHLP3

Location

Chromosome 2: 99,949,225-99,952,819 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 1628 variant alleles and maps to 106 oligo probes.

Gene

This transcript is a product of gene ENSG00000115514.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264255.3	TXNDC9-001	1637	226aa	ENSP00000264255.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2044	B8ZZX4 O14530	NM_005783.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409434.1	TXNDC9-002	1111	188aa	ENSP00000387275.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z7A4 B8ZZX4 Q8TB70	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434323.1	TXNDC9-006	733	122aa	ENSP00000406388.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WCJ3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409705.1	TXNDC9-004	568	135aa	ENSP00000386889.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZX4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000422767.2	TXNDC9-009	768	64aa	ENSP00000391046.2	Nonsense mediated decay		F8WBV5	-	-
ENST00000438680.1	TXNDC9-008	739	74aa	ENSP00000402827.1	Nonsense mediated decay		F8WBV5 G3XAJ4	-	-
ENST00000477337.1	TXNDC9-005	519	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463385.1	TXNDC9-003	1099	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465183.1	TXNDC9-007	599	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 599 bps,

Version

ENST00000465183.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000330314 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000465183.1 TXNDC9-007

Summary